Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs150190884 chr7:135608269 G/A 8.34E-5 110 13.1 27.93 0 KM Plot
LAML rs150203830 chr16:16297168 C/T 0.000187 108 16.77 11.13 0 KM Plot
LAML rs150540302 chr10:134970428 C/CACAA 5.63E-5 109 16.3 19.33 3 KM Plot
LAML rs150675721 chr17:30417185 C/A 0.000152 110 16.23 15.2 0 KM Plot
LAML rs150854595 chr12:9917138 T/TA 0.000121 109 16.2 14.17 0 KM Plot
LAML rs151208676 chr11:93150181 A/T 5.23E-5 111 6.13 14.13 16.27 KM Plot
LAML rs1514541 chr13:61586096 C/G 1.85E-5 111 11.68 21.27 0 KM Plot
LAML rs1543432 chr6:127698018 T/C 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs1551295 chr2:3219150 C/T 5.94E-5 111 0 14.7 15.2 KM Plot
LAML rs1555897 chr10:853674 A/C 1.45E-5 110 16.3 16.2 5.1 KM Plot
LAML rs1649330 chr2:109391783 G/C 0.000118 111 13.15 19.8 0 KM Plot
LAML rs16830037 chr1:43357978 A/T 0.000161 111 1.02 12.12 16.3 KM Plot
LAML rs17002025 chr19:12530177 C/T 0.000121 111 15.2 14.75 0 KM Plot
LAML rs17020084 chr2:37178623 G/C 0.000132 111 14.22 15.7 0 KM Plot
LAML rs1703915 chr8:625117 T/C 5.02E-5 109 0 9.1 16.27 KM Plot